Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015906191.1_cds_XP_016456401.1_50238
CDS Infomation

[gene=LOC107780386] [db_xref=GeneID:107780386] [protein=pentatricopeptide repeat-containing protein At2g26790, mitochondrial-like] [protein_id=XP_016456401.1] [location=complement(join(66205..66222,66393..68888))] [gbkey=CDS]
Sequence

ATGTGGGTTTCAACAATAAGGTCAGCTTCTTATAGATACCTATTCAAGAACAGCTATCAT
TTAATTCGACTTAAATCAGTTTCTTCAGTAGCTCAATTAAGCCCATATTTTTCGGATTCT
AGTTCTGATGAACAAAATGGAAATACCCAAATGAAAAATAGTACCAATAATATTCTTGAG
GTAAATTCTTATTGGGTCACTGAAATGCTCAACAGTTTAAAGGAAGAGCCTGAAAATGCT
TTATTATTTTTTCGTCAATTAAAAGAAAGTGGGTTTAAACATGATGTACAAACTTATATG
GCTATGGTTAGGACATTTTGTTATTGGGGTATGGATATGAAATTGGATTCTTTGTTTTTG
GAGGTTATAAATTGTGGAAAAAAGGATTTGGGGTTTGAGGTTTCTGATTTGTTTGAGGAA
CTAGTGGAGGGGTTAAATGCTGAGGGCCCTAATTCGTTGGTTCGGGCTTTGGATGCATTG
GTTAAGGCTTATGCTAGTTTAAGGATGTTTGATGAAGCTATTGATGTGTTGTTCAAGACG
AAAAGGTGTGGTTTTGGGCTGAGTGTGTTGTCGTGTAATTATCTCATGAATCGGCTTGTT
GAGTGCGGGAAAGTAGATATGGCCGTGGCGGTTTATAAACAGTTGAAGAGGATTGCGGTG
AAACCCAATGTGTATACATATGGAATTGTGATCAAGGCATTGTGTAGAAAAGGTAGTTTG
GAAGAAGCGGTTAATGTATTTGAGGAGATGGAGAAAGCTGGTGAAACTCCTAATGAGTTT
ACTTATTCCACTTATATTGAAGGGCTTTGCTCGTATGGTAGATCAGACTTGGCTTATGAT
GTATTGCGGGCATGGAAAGGAGCGAATCTACCCCTTGACGTCTATGCCTATACTGCTGTA
ATTCGCGGGTTTGTTAATGAGAAGAGGTTGCAAGAAGCAGAAATTGTTCTGCTTGACATG
GAGGAGCAAGAACTGATCCCTGATGCCTTTTCTTATGGGGCTATAATTCATGGTTACTGT
GATGCCGGGAATATTACTAAAGCTCTGGATTTCCATGACAAGATGGAAGCAAGGGGTATC
AAAAGTAATTGTGTAATTGTCAGCTCAATTCTTCAGTGCTTGTGCAAAAATGGCAAGGCA
TGTTATGTTGTTGATCAGTTCAGTAGTTTTATGAAGCAGGGTATTTTTCTTGATGAGGTG
GCTTATAATGTCGTAATTGATGCCCTGTGCAAACTCGGTAGGTTTGGAGAGGCGGTGAAG
TTGCTTGATGAGATGAAGGGTAAGAAGATGACACTTGACATTATGCATTACACTACTTTT
ATAAATGGGTATTGCCTCCATGGAAAAATACTAGATGCGTTGGAGTTATTTGAAGAAATG
AAAGAGAAAGGCTTGAAACCTGACGTTATTACTTATAATGTGCTTGCTGGTGGATTTTCT
AGAAATGGCCTTGTTAAAGAGGCACTTCACCTTTTGGACCATATGAAGGGACAAGGCTTG
ACTCCAACGACTGTCACACATAATGTGATTATTGAGGGCTTATGTGTTGGAGGTTATGCA
GAGGAGGCTGAAGCATTTTTTAGTAGTTTGGAGTATAAATCTGTAGAAAATTATGCTGCC
ATGGTGAATGGATATTGTGAATTAGGCAACACTAAAGATGCCTATGAACTTTTTGTTAGG
CTATCAAAACAAGGCATTTTAATTAGAAGGAACTCTCGTTTGAAGCTTCTCACTAGCCTC
TGTCTGGAAGGTGAATACGGGAAAGCCATAAAGTTGTTCGAGATAGTGTTGACTTTAGAT
GATGACACTTGTAAAATAATGTACAGCAAACTAATTGCTTGTTTATCTAGTGCTGGAGAT
ATGAAAAGGGCCAGGTGGGTGTTCGATAATATGGTTTGGAGAGGATTAACGCCTGACGTG
GTTATTTATACTATGATGTTAAATGGTTATTGCAAGGTGAATCACTTGCAGGAAGCTGTT
AATCTTTTTGATGATATGAAGGAAAGGGGCATTTCTCCTGATGTGATCACTTACACAGTT
ATGCTTGATGGTCACTCTAAGAATGTAAAAAGAGATCGATTGTCATCAGATACAGGGAGG
AATGGCGGAGAAAGAAAGGATACATGGTGGAATAATGGGGAAAAGACAGACCCTTCAACT
TTTTGGAGTGAAATGAAGGAGATGGAATTAAAAGCTGATGTTATTTGCTACACTGTTTTG
ATTGACAGGCACTGTAAATCAGATAACATTGATGATGCTATTCGCCTTTTCACTGAAATG
ATTGATCGAGGTTTAGAACCTGATAGTGTTACATACACAGCTCTGATATGTGGCTATTGT
AAGCAAGGACAGGTTGAGATGGCTAAAGACCTTGTGAATGAGATGTGGAGTAAGGGAATA
CAACCAGATAGCCATACAATCTCAGCATTACATCATGGCATCATAAAGGCCAAAAAGGTG
CACCTTAGGCATAACAATAACTCGGGAAAATCAGAGGTGATTCGATCCTCATAG

Peptide Sequence

PEP ID

XP_016456401.1
PEP Infomation

PREDICTED: pentatricopeptide repeat-containing protein At2g26790, mitochondrial-like [Nicotiana tabacum]
Sequence

MWVSTIRSASYRYLFKNSYHLIRLKSVSSVAQLSPYFSDSSSDEQNGNTQMKNSTNNILE
VNSYWVTEMLNSLKEEPENALLFFRQLKESGFKHDVQTYMAMVRTFCYWGMDMKLDSLFL
EVINCGKKDLGFEVSDLFEELVEGLNAEGPNSLVRALDALVKAYASLRMFDEAIDVLFKT
KRCGFGLSVLSCNYLMNRLVECGKVDMAVAVYKQLKRIAVKPNVYTYGIVIKALCRKGSL
EEAVNVFEEMEKAGETPNEFTYSTYIEGLCSYGRSDLAYDVLRAWKGANLPLDVYAYTAV
IRGFVNEKRLQEAEIVLLDMEEQELIPDAFSYGAIIHGYCDAGNITKALDFHDKMEARGI
KSNCVIVSSILQCLCKNGKACYVVDQFSSFMKQGIFLDEVAYNVVIDALCKLGRFGEAVK
LLDEMKGKKMTLDIMHYTTFINGYCLHGKILDALELFEEMKEKGLKPDVITYNVLAGGFS
RNGLVKEALHLLDHMKGQGLTPTTVTHNVIIEGLCVGGYAEEAEAFFSSLEYKSVENYAA
MVNGYCELGNTKDAYELFVRLSKQGILIRRNSRLKLLTSLCLEGEYGKAIKLFEIVLTLD
DDTCKIMYSKLIACLSSAGDMKRARWVFDNMVWRGLTPDVVIYTMMLNGYCKVNHLQEAV
NLFDDMKERGISPDVITYTVMLDGHSKNVKRDRLSSDTGRNGGERKDTWWNNGEKTDPST
FWSEMKEMELKADVICYTVLIDRHCKSDNIDDAIRLFTEMIDRGLEPDSVTYTALICGYC
KQGQVEMAKDLVNEMWSKGIQPDSHTISALHHGIIKAKKVHLRHNNNSGKSEVIRSS

Transcript Sequence

Gene sequence data has not been registered.